BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023G04LP1|AL428104
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1663 1619 0.0
>3x_Contig1663
Length = 13533
Score = 1619 bits (812), Expect = 0.0
Identities = 856/876 (97%)
Strand = Plus / Minus
Query: 1 atttcaccgcatcagcaatagaactaaacttctttgacatgttcgtattatgaaaattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11178 atttcaccgcatcagcaatagaactaaacttctttgacatgttcgtattatgaaaattca 11119
Query: 61 gtagaatcacagctagtgtcgtacttcagcgatggaaatattaccattaaggatgaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11118 gtagaatcacagctagtgtcgtacttcagcgatggaaatattaccattaaggatgaaata 11059
Query: 121 tctcattcactctgttttttatctcgtaattgtgtgtatgtgcacttatataaagtataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11058 tctcattcactctgttttttatctcgtaattgtgtgtatgtgcacttatataaagtataa 10999
Query: 181 attaacattacaatttatatctaagaaaagtgtgtctagttttcgtttcggtatgacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10998 attaacattacaatttatatctaagaaaagtgtgtctagttttcgtttcggtatgacatt 10939
Query: 241 gagcataataacaaatcattcttggtaacagatcatcgatgtttagaaaaagccatcttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10938 gagcataataacaaatcattcttggtaacagatcatcgatgtttagaaaaagccatcttg 10879
Query: 301 tatcgtttcgtaatgcggaggagcgttgtctcaatttgaatatyattttagtttttattt 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 10878 tatcgtttcgtaatgcggaggagcgttgtctcaatttgaatattattttagtttttattt 10819
Query: 361 tgttattctttaaaccccttaatggtgagcatctcccaattcttccaacactaaccagtc 420
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10818 tgttattctttaaatcccttaatggtgagcatcttccaattcttccaacactaaccagtc 10759
Query: 421 accttcttcaacttcagcagattgttcattagcctcgcygacggtttcgacaccagaaga 480
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 10758 accttcttcaacttcagcagattgttcattagcttcgctgacggtttcgacaccagaaga 10699
Query: 481 tgcgtattccctcaaagcatcggcagattgcmattccagttccggaagccttggagcagc 540
|||||||||| |||||||||||||||||||| |||| ||||| |||||| ||||||||||
Sbjct: 10698 tgcgtattccttcaaagcatcggcagattgcaattctagttctggaagctttggagcagc 10639
Query: 541 cggggtggtccatggcttaacagcaccttgggcatcggcagccgtgattggcttcaaatt 600
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 10638 tggggtggtccatggcttaacagcaccttgggcatcggcagctgtgattggcttcaaatt 10579
Query: 601 cacggccttcaattcctttaagtataggtcttggatgacattacgtctgacgaaaccggt 660
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 10578 cacggccttcaattcctttaagtataggtcttggatgacattacgtctgatgaaactggt 10519
Query: 661 ggaaaaaccacggccggctcttaaggtcaatggtacggctctgaacattatktaacactt 720
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 10518 ggaaaaaccacggctggctcttaaggtcaatggtacggctctgaacattatgtaacactt 10459
Query: 721 tcttktgctttccctaggctagtctaaaacacttcatttataagtkaccggtgtytattc 780
|||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 10458 tcttgtgctttccctaggctagtctaaaacacttcatttataagttaccggtgtctattc 10399
Query: 781 gctcactaacggaatcttcattccaattaaacctttgaacctcaattttcttggtgcata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10398 gctcactaacggaatcttcattccaattaaacctttgaacctcaattttcttggtgcata 10339
Query: 841 taaatcatataatacgaacatgatatttwttggttc 876
|||||||||||||||||||||||||||| |||||||
Sbjct: 10338 taaatcatataatacgaacatgatatttattggttc 10303
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6064
Number of Sequences: 1807
Number of extensions: 6064
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)